TF-Prioritizer: a Java pipeline to prioritize condition-specific transcription factors
1 May 2023·,,,,,,,
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0 min read
Markus Hoffmann
Nico Trummer
Leon Schwartz
Jakub Jankowski
Hye Kyung Lee
Lina-Liv Willruth
Olga Lazareva
Kevin Yuan
Nina Baumgarten
Florian Schmidt
Jan Baumbach
Marcel H Schulz
David B Blumenthal
Lothar Hennighausen
Markus List

Authors
Nina Baumgarten
(she/her)
Postdoc
I am a bioinformatician with a diverse background in analyzing genetic and epigenetic data. I have had the chance to work on a variety of projects since I joined the lab, like decoding the effect of non-coding variations, analysing GWAS data, and studying TF binding. Recently, my focus has been shifted toward spatial transcriptomics, which allows me to map genetic findings directly onto tissue architecture. I am motivated by the possibility that these data-driven insights might lead to a better understanding of complex diseases. In my free time, I love spending time in nature for hiking—it’s where the best ideas come to me!